Web11 Nov 2024 · CLIP-Seq answers questions about the functional role of an RNA-binding protein and its targets by determining binding sites on a nucleotide level and associated sequence and structural binding patterns. WebOriginally Answered: what is the difference between ChIP-seq and DNase-seq? In ChIP-Seq, you first isolate chromatin but then you use an antibody to immunoprecipitate a specific factor in the chromatin, it could be a histone mark, or a transcription factor, for example.
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